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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24345477, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRRQFFKLC AAGAATSAIS ALGLMSEKAY AAVREFKLLG AKETRNNCPY CSVGCGLLMY  60
   61 SQGSGGKNSE HAIFHIEGDA DHPVNRGALC SKGAGLVDYV NSPHRLQYPE YRAPGSNKWE 120
  121 RISWQDAFKR IARLMKDDRD ANLIEKNADG VTVNRWLTTG MMTSSGMANE SGLATQKFAR 180
  181 ALGLVAIDTI ARNUHSPTVA SLAPTFGRGA MTNHWIDIKN SNVVIIMGGN AAEAHPVGFG 240
  241 WVTEAMQHNN AKLIVVDPRF NRSASLADHY APIRSGTDIA FLLGVIRYLI STNQVNFDYV 300
  301 KAYTNASYLV RDDFDFHDGL FSGFDEAKGE YNKESWFYQL DEDGYAIVDE TLEHPRCVWN 360
  361 LLKQHVERYD FATVSNITGT PTEDYQVVCD AIASTHTKDR VATFMYALGW THHSKGAQNI 420
  421 RSMAMIQLLL GNIGQLGGGV NALRGHANVQ GSTDMGLLAQ SLPGYLKLPN DKEPTLAAHL 480
  481 AANTPKPLRP GQTNYWQNYP KFYVSLLKAF WGENATPENE FGYQWLPKWD QMYDFGKHLD 540
  541 MMYRGKVNGC IVQGVNAINS MPNRNKNIKA LSNLKFLVVL DNLSSETATF WQNEPGFNEV 600
  601 DTASIQTEVF RLPATVFAEE EGSIVNSGRW MQWHYKWANP PGEAMSDSEI VSGLLLELRK 660
  661 LYREEGGKLP EPIQAINWNY TDPHNPSSIE LTKELNGYDV ATKRQISSFA ELKADGSTAS 720
  721 ACWVYAGSWT EAGNQMARRD NHDPSGKGIT PGWAFAWPLN RRVLYNRASC DVNGKPWDEH 780
  781 RKIVEWKDGK WEGIDVPDFN AKLNPQESAH PFIMQADGVG RFFALKLLKE GPFPEHYEPV 840
  841 ESPIGTNPLH PNVVHSPVLR WFEGVKDTIG TKEEYPYACT TYSLTEHFNF WTTHCRLAAI 900
  901 AMPETFVEMN EQLAAEKGIK NGDWVKVSSK RGHILTKALV TKRMRPLQVN GQTVHTLGIP 960
  961 RHGSHNALTR KSYSCNVLTT EMGDANTGVP EYKAFLVNVE KAEV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle