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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24371939, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGFIGVALS QPILRLIFSV LCIISFFTVP STGLALPLNA ANTQLKFEHI RSEDGLNQNT  60
   61 ITSLFMDSAG MLWIGTQDGL HSYNGYNFNL FIHSPNDPKS ISESYVSDII QDAEGYLWVG 120
  121 SFSQGINRLD LKTGTFKRFG VEQGLTDPRV TKLNIVGNTL WIGTQSGLFS FSTRTNRLTK 180
  181 VSLGTSIEPY ITSLANVDNT YLLAGTKGSG TFAVSANTIT RLNIPQDAIA YQVKANSSRA 240
  241 ITLALGNQLW HYDLATQQGK ALWQADKNIP YIKDFIQTPE GQFWVVGPEA GLIQLEREAD 300
  301 KFVATYHQYD MKRTNSISEN NILSLLEDPF GNLWLGASYS GLNKINTRRQ YFQHLFEYTN 360
  361 ELPLQSNNVR TIYRSQDQAL WIGTEGAGLK RLAVNSTTFE HYTSFFAKAL GQQTQHLNLI 420
  421 LRSIVQDKQG ILWFASNYGL GRLTPNGEFN LLNVADSRDT SAEANYIRSL ELDNQNRLWV 480
  481 ATSHALYRKS SVNDEFTPVP LTGIENFHPI QNLLLTLKSD KNILWIGSLN GLVKLDMQTG 540
  541 HGEVFYHDPH DKNSIINNRI RDIFVASNGD TWFATHGGIS RLPAQALSPI FSDYTREQGL 600
  601 PSDTIYALLE DDDNHIWFSS NAGIGKLNPH NGKIINFNEQ EGLQALEFNG GVKLKDSDGD 660
  661 LWFGGINGIN RFNPKTLPNQ RSEARVALTA YKIAGQKQTI LDLSHPPQIV MNYADQLISF 720
  721 EVTSLDFSYP GKNRFSYFLE GFDNQWHDLP TGNEITFTNI DPGNYLLHVR HSLEYNSKGN 780
  781 YALLVNLTVK APFYRTPFAY AFYVLFTLVS MGWALRWRKQ KRSQQQEFET SIRASEERLK 840
  841 LALWASGDGM WDWNIQEQQV YRTNTDIAVP QWNGHQLLHD NAHPEDRERF KYELTEHLQG 900
  901 RSPFFEVEYR IEHSPGKWVW ILERGKVVET NAQERPIRMT GTTRNITSRK LIENELVLSS 960
  961 QVLNSMNEAV VVAGLDYRIR SVNPAFSAIT GYSEGQISDK FLIHLAYSRQ QRDLFNSIEQ1020
 1021 QLLRHKHWAG EIWIRNKARR AILVWLEINQ VIDVKGETSH FVAVFTDITE RKKAEEDLRF1080
 1081 LASFDTLTGL PNRTLFQDRL NHAISQAHRS NNIVALLFLD LDRFKHINDS MGHHIGDLLL1140
 1141 KAVAHRLQSA VREGDTVARL GGDEFTIILE GVAKTKAATL ISEKVLKAFQ APFLLDDKSL1200
 1201 NISTSIGISL YPNDAKDVDS LIKFADTAMY HAKALGRNNF QFYTNKLNEM ATRHMQLETG1260
 1261 LKQAISHNEL SLVYQPKFCL RNGSLTGLEA LLRWQHSELG PISPAEFIPL AEETGMINQI1320
 1321 GHWVINQSCQ QLAEWNELGF SDISMAVNLS ARQLKADIIS TIEVALAVSG LPAKALELEL1380
 1381 TESMIMGNPQ ESVNILSKLK ALGLTIAVDD FGTGYSSLSY LKRFPIDTLK IDREFVRDIT1440
 1441 NDPDDAAITS AIIALAHSLE LNVVAEGVET QEQLNFLALQ GCDQVQGFLL SKPLSAQDCQ1500
 1501 TLLQQRTKDR QDVKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle