YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24346884, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNVKTLALA ATAVAAISGN AFAADRSDLR AGDHSWMQFN AMYAVNELPR DGSTDNGHDY  60
   61 LEMEFGGRAG VVDLYGYVDV FNVTNRDYGD KAAGSGKSKL FMKFAPRFSL DAITGMDLSV 120
  121 GPIQEVYFST LFNWDDRIGE GVNSTFWGLG ADVMVPWLGK TGMNLYAYYD LNGKDWNGYQ 180
  181 FSMNWFKPVV NFDNGSFIAF QGYVDYQFGA DEVNAYDANG QYVNTTFTSN GGAAYFGLHW 240
  241 HSDNYALGYG LKAYNDVYLL KDEGTFGLET KGFAHYFTAT YKF

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	283	0.99