YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24347791, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSEQNVKK QRPVHLDLQT IRFPATAIVS ILHRVSGVIM LFAVGILIWL LNSSLASAES  60
   61 FAGVQSLFDN FVVKFIMWGI LTALTFHLFG GLRHLVMDTG RWEELASGTA SAKAVFVLTV 120
  121 AFSILAGLWV W

Type	Start	End	Confidence
Cytoplasmic	1	30	0.94
Transmembrane Helix	31	51	0.92
Non-Cytoplasmic	52	70	0.86
Transmembrane Helix	71	96	0.81
Cytoplasmic	97	108	0.88
Transmembrane Helix	109	130	0.90
Non-Cytoplasmic	131	131	0.97