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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24347883, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNMLIKGLI ATAVLTALAG CNSDDDKVPT TCAEAGAACK TFTILHTNDN HGRFWENKDG  60
   61 EYGLAAQKTL VDQIRAEVSK KGGQTLLLSG GDINTGVPES DLQDAIPDFT GMNKIGYDAM 120
  121 AVGNHEFDNP LSVVDMQRSL AEFPMLAANI YKADGTRYFD AYKIFDVNGV KIAVIGLTTE 180
  181 DTAKIGNPEY ISELEFRDPK KEVANVIKEI KEAKSADIIF AVTHMGHYAD GQNGSNAPGD 240
  241 VALARSLKEG DLQVVIGGHS QNPVCMEPGN KAYAAFKPGD ACAPDQQNGT WIMQAHEWGK 300
  301 YVGRADFEYF NGELHLASYK LVPVNLVKEV TDEAGNKKKV LVGEKIEPDT ELKELLSYYQ 360
  361 EKGQAKLDEV IATTDALLDG ERANVRNKQT NLGRMLAMAQ SGKVSADFGV MNSGGVRASI 420
  421 KAGNITYRDV LTVQPFGNMV TLNEMTGAAA ADYLGAVGSL QIGSGGYAQI TGVKMTVDCV 480
  481 AKKATVHEIN GKAFSATATY KFTVPSFNAA GGDGYPKLVS PIQTGYVDAD LLYTFLKEKQ 540
  541 SIVAADYNPV GDIVYENSDS VEGCKITAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle