YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24374652, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIARIFGYFE EGVLNLLITL MTLLVFTEVV ARFFFDTGFL WIQELTLTLC GWFVLFGMSY  60
   61 GVKVGAHIGV DALVKKLPPN AKKITSLITT LICLTYCILF LKGSWSYLSQ MYQIGVPMED 120
  121 IHFPAWLLAR LDPDWAWNVL KIDIEDGAVP IWISQSILLI GFSMLTWRFI ELFVAILRNQ 180
  181 VTGLSFADEA KESMHLIDDT AIQSQGPQHT TGAAHKELP

Type	Start	End	Confidence
Cytoplasmic	1	11	0.94
Transmembrane Helix	12	34	0.89
Non-Cytoplasmic	35	44	0.73
Transmembrane Helix	45	64	0.89
Cytoplasmic	65	83	0.86
Transmembrane Helix	84	105	0.91
Non-Cytoplasmic	106	147	0.95
Transmembrane Helix	148	170	0.85
Cytoplasmic	171	219	0.95