YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SO3272
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRLMLTDAR WEKLFHLMKS TGRVYDKPEH RQTFEGILYR LRTGIPWRDL PKEFGHWSTV  60
   61 FRRFHLWSKK GVLAHLFKAL ANLADIEWVF IDGSIVRAHQ HSAGAATLSN ESIGKSRGGH 120
  121 STKIHLAVDS GGLPIYFELS EGQKHDITHA PSLIEHLKQV DTVIADKGYD SDAFRELIAN 180
  181 KGGKSVIPRR RYKNTPQERV DWCLYRYRHL VENAFGRIKH YRAISTRYDK LARNYASMVS 240
  241 LAFMLMWLPM YC

Type	Start	End	Confidence
Cytoplasmic	1	230	0.77
Transmembrane Helix	231	251	0.74
Non-Cytoplasmic	252	252	0.97