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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24375186, gi|...
Protein type: Transmembrane
Type Confidence: 0.67
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLRTKLVIY STVCCAFGVL LTLATMKYLF STSSPEVATP ATLPDVQLPE LDLAQLQDSV  60
   61 AAIESAIKNT EQFQQAFSLQ ERLRADQIKH ELQKLEQLKQ EQLQIKLYKL ELLKQGLFNP 120
  121 APHPANMVPA LPVVEQSKLP PLSLDPQAEH TPPIFELVLV ILLACSVCAL GVAWFTRHLA 180
  181 RSLDALEVGL LNFNDNDFSV SIPTNGEGQL KTLAELFNHS AAKLRQERQY IYQRELLLDK 240
  241 VIQSSPNVML LLNDHQRLMY ANDAARHLFQ IKGKMEGLSL EELLQELPEA LALALKQEKS 300
  301 GLFTMGEDDA ETWYLSRGQF LLNNQQHNLI LLKQMTRELN RQEVAVWKKV IRIISHELNN 360
  361 SVAPIASMVN SGRLLTKDLD NPKLKLIFDT IESRTNHLSQ FIYNYARFAK LPLPQRRKVA 420
  421 WSQLIEQLTQ HYPFSLTHEL PIEDGYVDQG QMEQVLLNLL KNAHESGSNP EEVTLSIRYQ 480
  481 KMVDGGGFSI KIEDRGSGMS EEVLEQALLP FYSTKQSGTG LGLPLCREII EAHDGSISMH 540
  541 NRTEGGLSVL LWLPQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle