YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24350304, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.84
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKPSIKSLP ASKLAIVVIT SALIASGCTT VNPYTNEQQT AKATTGALIG AVAGAAVGVA  60
   61 SSSKSDRGKG ALIGAASGAA LGGGIGYYMD VQETKLRQQL ASTGVSVTRS GDNIILNMPN 120
  121 EVTFGVDQTE LSDGAKRVLN SVALVAKEYS KTQLNVLGYT DSSGSDSYNL RLSQVRASEV 180
  181 GNYLMSKGVA SARVKSKGMG EASPIASNAN AEGRAQNRRV EIVLTPTG

Type	Start	End	Confidence
Cytoplasmic	1	10	0.78
Transmembrane Helix	11	31	0.76
Non-Cytoplasmic	32	40	0.77
Transmembrane Helix	41	61	0.79
Cytoplasmic	62	69	0.73
Transmembrane Helix	70	89	0.81
Non-Cytoplasmic	90	228	0.96