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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|24350346, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGYGLISLA ILMILSAFKL VNMRTRYLAQ LPLQSNVLWR LFPILFAFLF SSLSVLASPG  60
   61 GQIPLTTAVI DRVSAPTPVL RVSMILSVDT PFNRQIGARA QAAAVDLNIQ LQVLYADGTH 120
  121 DGLMTLGREV MNQGIDGLIF SPVDDFGEAL IREAQKLKIP VVTLRAKLDM LSSAALAELP 180
  181 NFIANVNIND QKSGQLLMHY LLSVDQLNRD VPAVLLIAGP QGYPNVERGV EDVQRFMNSL 240
  241 STRGTLKIAY TDWSVEQALA QFDSAIAAQP ALTTVVTMNA SAAVAVAAKA HQQLGANAPA 300
  301 IGSMIWSESL VQDIKQGKIQ AAITGSEFSG AIALSILFDH LSARGGPSRK GSFVAPLVVI 360
  361 TPNNYQDYES ILDFDPLRLN FRQISQHFNP DLSINELRLA DLLTSEARVN FLKTLTEPEL 420
  421 NFLRQHPSIR VGIEPDGAPI DYVDQAGKHT GLIASYLSEI AKLIPVRFEV QPTQSWGQTL 480
  481 KDFAADKLDM ISLISASEDR KQRILFTDAI GHFPAVIVMR KDAELVDGIE GLFGKTVAVT 540
  541 RGDITEELLR KKYPEINIIA FDRLEDVLST TLASQVDAAV MLLPKAGQSL LSPANKELTI 600
  601 VAPLDDEFEH SIGVRRDWPE LQSILNKALA QIPSSTRAEL DSRWFTVKYD FGMDPQQIKR 660
  661 WAISSAMVIL GLFACFILWN YGLKRELLRR SRMAAQLESS MNKFHALFDS VMDACVIIDK 720
  721 RGVIKECNAA LQTLLGVEDK TALVGTSLTQ FHLADTFMGS AVQIAQSVED VLKQGLLKFE 780
  781 ADITDSQGQS IPAEVTLKSI ELNTERFVLA TYHNLAERRL VDRLIRHERN LLKNVLGMSP 840
  841 IGVWVCVNGT CRYVNAQMTL MTGLEVEHAV ADIFLQPKDY WHYIRELAPE QECITFESKL 900
  901 KGYHGQILDV LFTAYPTFYD GQHANLCWAL DITQEKAIQA ELASAKLQAD AANRAKSDFL 960
  961 ANMSHEIRTP MNAIIGMSYL ALQTDLAEKR KDYIAKVHQA AGSLLNIIND ILDFSKIEAN1020
 1021 KLTVEHIEFD LDEVLTQLNN VIGFKVEENS MRLIYDIATD CPRYFIGDPQ RLGQILLNYC1080
 1081 NNAVKFSPKG SDILLSCQAE LDKQGATLTF CVADDGIGIP LDKQARLFHS FEQGDTSTSR1140
 1141 KYGGTGLGLA ICKRLSELMQ GEVWCESELG QGSRFYLRLH LPLVKPYDLS TQFAALQGES1200
 1201 LSIVGFMPDL SAIYSRFAAR VGMQARTLEM HMALAELSAC TSQHLIMCET NAFEPELLSV1260
 1261 VLANDKLGLL LIGNGSEPVA IQSLVDKHPQ IIAKQHPILL RTLGESLLLL LNRDRAPFGQ1320
 1321 HLEHQSITTL KNQLAGVELL LVEDNYLNQE LAVELLRQAG ARVTVAQHGQ EALTLLAQQS1380
 1381 FDCVLMDGQM PVMDGYEATR LIRAQPQFAD LPIIAMTANA MDSDRERALA AGMNAQINKP1440
 1441 FQVQQLYSTI AQHVSVHSVQ SLPESPEAHD LDKAQLKQGL PLVEELDIDA GLALCNYNAD1500
 1501 LYRHLLTLFV QTGAKLLQNQ QNEFSQDNLS ALRLSLHTLK GVAGNIGAVS LKEDSGRLEA1560
 1561 SLTDISSLQQ LDANIQETVS QEIHLLHAKL QQLLTLLAEW QTVNQPDEAS QSISMTELMR1620
 1621 LFAQLTQNLK EYNTDALSLV ERLSQLTVLQ PQRQLIAELK QATGQFDFSQ GLELAIQLQE1680
 1681 WAQQQLAKE

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