YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24376064, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNWRALFKPS AKYSILALLV VGIVIGVVGY FATQQTLHAT STDAFCMSCH SNHSLKNEVL  60
   61 ASAHGGGKAG VTVQCQDCHL PHGPVDYLIK KIIVSKDLYG FLTIDGFNTQ AWLDENRKEQ 120
  121 ADKALAYFRG NDSANCQHCH TRIYENQPET MKPMAVRMHT NNFKKDPETR KTCVDCHKGV 180
  181 AHPYPKG

Type	Start	End	Confidence
Cytoplasmic	1	12	0.72
Transmembrane Helix	13	32	0.78
Non-Cytoplasmic	33	187	0.98