YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|24376148, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRFFYSALL YLLSPLLLAY LAFRAIKSPD YRGRWGERFG LAQLKPTDLL IHSVSMGETL  60
   61 AAIPLIRLIM QMHPELSITV TTTSPTGSAE VRKAFGDQVQ HCYLPFDLPW CVSRFLRQLS 120
  121 PKWCIIMETE LWPNLVELAA KRGVRLMLAN ARLSAKSAAQ YAKRSQLSRP MLQRLDVIAV 180
  181 QTQAEAQRFI DLGVAADRVT VCGSLKFDLS ITPDRLTLAR ELRQTWGKET APVWVAGSVH 240
  241 PGEFDAMLSA HKRLLAKWPE ALLIIAPRHP EQFAAVADVV ARQGFEYVRR SDAQAITATT 300
  301 QVLVGDTMGE LLTFYGAADQ AFVGGTLIEN GGHNPLEPVA MGVPVMVGPN HWDFAQITQM 360
  361 LADAGGLRIV SSGQELAENL IQYFKQPVLC QQAAKAGLAV VEANRGALQR QFALAELLLT 420
  421 RQTA

Type	Start	End	Confidence
Signal Peptide	1	24	0.91
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	424	0.99