YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATPF_COREF
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANPIYILAH ANAEYLPLES GNSILLPKAY DIVWSLIPFL IILFVFWKFV LPKFQEVLTE  60
   61 REDRIKGGIQ RAEAAQAEAK AALEKYNAQL AEARTEAAEI REQARERGKQ IEVEMKAKAE 120
  121 EESNRIIEAG TKQLMAQREQ VVNELRREMG QNSINLAEHL LGDQLSDDVK RSGTIDRFLA 180
  181 DLDTVAPNGK

Type	Start	End	Confidence
Cytoplasmic	1	29	0.56
Transmembrane Helix	30	51	0.88
Non-Cytoplasmic	52	190	0.59