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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26246972, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRVCRGIVN LNQSMRSPDS MESNNGEAKI QKVKNWSPVW IFPIVTALIG AWVLFYHYSH  60
   61 QGPEVTLITA NAEGIEGGKT TIKSRSVDVG VVESATLADD LTHVEIKARL NSGMEKLLHK 120
  121 DTVFWVVKPQ IGREGISGLG TLLSGVYIEL QPGAKGSKMD KYDLLDSPPL APPDAKGIRV 180
  181 LLDSKKAGQL SPGDPVLFRG YRVGSVETST FDTQKRNISY QLFINAPYDR LVTSNVRFWK 240
  241 DSGIAVDLTS AGMRVEMGSL TTLLSGGVSF DVPEGLDLGQ PVAPKTAFVL YDDQKSIQDS 300
  301 LYTDHIDYLM FFKDSVRGLQ PGAPVEFRGI RLGTVSKVPF FAPNMRQTFN DDYRIPVLIR 360
  361 IEPERLKMQL GENADVVEHL GELLKRGLRG SLKTGNLVTG ALYVDLDFYP NTPAITGIRE 420
  421 FNGYQIIPTV SGGLAQIQQR LMEALDKINK LPLNPMIEQA TSTLSESQRT MKNLQTTLDS 480
  481 MNKILASQSM QQLPTDMQST LRELNRSMQG FQPGSAAYNK MVADMQRLDQ VLRELQPVLK 540
  541 TLNEKSNALV FEAKGKKDPE PKRAKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle