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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26248153, gi|...
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSGRCLMIN RIRVVTLLVM VLGVFALLQL ISGSLFFSSL HHSQKSFVVS NQLREQQGEL  60
   61 TSTWDLMLQT RINLSRSAVR MMMDSSNQQS NAKVELLDSA RKTLAQAATH YKKFKSMAPL 120
  121 PEMVATSRNI DEKYKNYHTA LTELIDYLDY GNTGAYFAQP TQGMQNAMGE AFAQYALSSE 180
  181 KLYRDIVTDN VDDYRFAQWQ LAVIALVVVL ILLVAWYGIR RMLLTPLAKI IAHIREIAGG 240
  241 NLANTLTIDG RSEMGDLAQS VSHMQRSLTD TVTHVREGSD AIYAGTREIA AGNTDLSSRT 300
  301 EQQASALEET AASMEQLTAT VKQNADNARQ ASQLAQSASD TAQHGGKVVD GVVKTMHEIA 360
  361 DSSKKIADII SVIDGIAFQT NILALNAAVE AARAGEQGRG FAVVAGEVRN LASRSAQAAK 420
  421 EIKALIEDSV SRVDTGSVLV ESAGETMNNI VNAVTRVTDI MGEIASASDE QSRGIDQVAL 480
  481 AVSEMDRVTQ QNASLVQESA AAAAALEEQA SRLTQAVSAF RLAASPLTNK PQTPSRPASE 540
  541 QPPAQPRLRI AEQDPNWETF 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle