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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|26109013, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFSMHYMKW IYPRRLRNQM ILMAILMVIV PTLTIGYIVE TEGRSAVLSE KEKKLSAVVN  60
   61 LLNQALGNRY DLYIDLPREE RIRALNAELA PITENITHAF PGIGAGYYNK TLDAIITYAP 120
  121 SALYQNNVGV TIAADHPGRE VMRTNTPLVY SGRQVRGDIL NSMIPIERNG EILGYIWANE 180
  181 LTEDIRRQAW KMDARIIIVL TAGLLISLLL IVLFSRRLSA NIDIITDGLS TLAQNIPTRL 240
  241 PQLPGEMGQI SQSVNNLAQA LRETRTLNDL IIENAADGVI AIDRQGDVTT MNPAAEVITG 300
  301 YQRHELVGQP YSMLFDNTQF YSPVLDTLEH GTEHVALEIS FPGRDRTIEL SVTTSRIHNT 360
  361 HGEMIGALVI FSDLTARKET QRRMAQAERL ATLGELMAGV AHEVRNPLTA IRGYVQILRQ 420
  421 QTRDPIHQEY LSVVLKEIDS INKVIQQLLE FSRPRHSQWQ QVSLNALVEE TLVLVQTAGV 480
  481 QARVDFISEL DNELSPINAD RELLKQVLLN ILINAVQAIS ARGKIRIRTW QYSDSQQAIS 540
  541 IEDNGSGIDL SLQKKIFDPF FTTKASGTGL GLALSQRIIN AHQGDIRVAS LPGYGATFTL 600
  601 ILPINPQGNQ TV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle