YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32185285
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFGLCQYF SYIYVSLSSL PLSAARMATP ASTPDTRALV ADFVGYKLRQ KGYVCGAGPG  60
   61 EGPAADPLHQ AMRAAGDEFE TRFRRTFSDL AAQLHVTPGS AQQRFTQVSD ELFQGGPNWG 120
  121 RLVAFFVFGA ALCAESVNKE MEPLVGQVQD WMVTYLETRL ADWIHSSGGW AEFTALYGDG 180
  181 ALEEARRLRE GNWASVRTVL TGAVALGALV TVGAFFASK

Type	Start	End	Confidence
Cytoplasmic	1	195	0.75
Transmembrane Helix	196	217	0.92
Non-Cytoplasmic	218	219	0.80