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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28210589, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKIRKEKEI KTLWNRFLYS IIFSIPLLFV SMGHMVGMPL PEFLDPIKSP QNFALTQLIL  60
   61 TTPVVVMGNK FYSVGFKTLF RREPNMDSLI AIGTLSAYLY GIFAVYEIFM GNIEYVHRLY 120
  121 FESAAVILTL ITLGKYLEAV TKGKTSEAIK KLMNLAPKTA TVIREDREIS ISVDEVEVED 180
  181 IVIVKPGARL PVDGIIVEGI TSIDESMLTG ESIPVEKNKD DKVIGGSINK NGYIKYRATK 240
  241 VGKDTTLAQI IKLVEEAQGS KAPIARMADV IAGYFVPIVI TLAIISSLAW GLYGKNFSFS 300
  301 LTIFISVLVI ACPCALGLAT PTAIMVGTGK GADYGVLIKS GEALETTHKI DTVIFDKTGT 360
  361 ITEGDPKVTD IITIGEIAEN EILAIAASAE KGSEHPLGEA IVRELKNRKI QFKTVEEFQA 420
  421 VPGHGIRAKI ENKNLLLGNK KLMIENNIDL DKAEESAIKL AEEGKTPMYI VIDDNIQGII 480
  481 AVADVLKENS KKAIEELHKM NIEVVMITGD NKRTAEAIGK KVGIDRILAE VLPEDKALWV 540
  541 KKLQGEGKKV AMVGDGINDA PALAQSDVGI AIGSGTDVAI ESADIVLMRS DLMDVPTAIL 600
  601 LSKKTIKNIK ENLFWAFAYN TIGIPIAMGL LYLFFNGPLL NPMIAAAAMS FSSVSVLLNA 660
  661 LRLKSFKPIR 

YRC Informatics Platform - Version 3.0
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