YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28805609
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVIVLGSGV IGLTSAWYLS QAGYQVTVID RQPSSAMETS FANAGQISYG YSSPWAAPGI  60
   61 PLKAIKWLME EHAPLKIKPS LSTDMISWAS KMVANCTLPR YQINKARMLS IANHSRACLE 120
  121 QLRNEHAIEY QGRQFGTLQV FRTTQQLTAI EKDLKLLEQS GTRFELMDVE QCLRQEPGLA 180
  181 LVKDKIVGGL YLPDDETGDC FQFCQQLTEL AKAHGVTFKF NTEVSNWVTV GKKIIGVQTN 240
  241 HGLFKADQFV VASGSFSTAL LKQLDIDIPV YPVKGYSLTL PIENEEYAPR STVMDETYKV 300
  301 AMTRFDDRIR VAGTAELAGF DPSLPQKRKN TIEMVVRDLF PRGGDFSQAE FWTGFRPMTP 360
  361 DGTPIIGATP YDNLFTNTGH GTLGWTMACG SGHLLANIMT GEKAKIMENS ELNLLRYA

Type	Start	End	Confidence
Signal Peptide	1	22	0.60
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	418	0.98