YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28805855
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVFGRLFLV LVAALGLSAC SSLPEELNAS TEQVVTDYKA FAESQGELTN DVRLGGIIAK  60
   61 VDNFKDKTRL EIVNLPINKS GKPDIDQEPT GRFAVYFDGY LEPVAFSQGR LVTIVGKGAG 120
  121 EEEGKIGEHE YVFPLVKGQG YRLWKIEERV RMYDSPTYFY PCYSINCRML RNDFPQDGKV 180
  181 IKQVK

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	185	0.99