YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28809863
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKTVIGAIA LLGAMAVTPV SAKETISAVG SSSVTPLMEV FSETYMKTNP NVFIEVQGPG  60
   61 SSAGVKAAKN GSADLGMSSR NLKESEKEPT LVEEVVARDG IAVVVNPQNK LAGLTAEQVT 120
  121 AIYKGEVSNW KEVGGEDKPI VAITRDTASG TRGAFEDIMA LKMKISGKKV SAISQRAQVA 180
  181 NGNGALKTMV ASNPYAIGYI SLGTVDNTVN ALAIDGVDAT VANVKNGSYK VARPFLVLYK 240
  241 EGKPSAETQK FLDWMLTEDA QKLVDQNGYI SVH

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	273	0.99