YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29374937, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESKTFDIEG MSCASCAQTI EKATAKLPGM AKASVNLATE KLSVTYDQTE VTEEEIKEAV  60
   61 SDAGYKAISP AQQRTFAIEG MSCASCAQTI EKAVNQLSGV QQAIVNLATE KLVVSYDDHQ 120
  121 VTSAEIIKAV TDAGYQATEE VAAGATADQD REKKQKHIAE MWQRFWISAV FTVPLLYIAM 180
  181 GHMVGLPLPD FLNPMTHAMT FAMVQLILTL PVLYVGREFF TVGFKALFKG HPNMFSLVAL 240
  241 GTSAAFVYSL YGTVMIFLGD TSFTMALYYE SAGVILTLIT LGKYFEAVSK GKTSDAIKKL 300
  301 MGLAPKTAHI LRDGVEIEVP VDAVQLDDIV IVRPGDKIPV DGVIVSGSSS VDEAMLTGES 360
  361 LPVEKKVGDA VIGASINKNG SFQFKATKVG KETALAQIIQ LVEDAQGSKA PIAQLADKIS 420
  421 GVFVPIVIGL AVLSGLAWFF LGQESWIFAL TITISVLVIA CPCALGLATP TAIMVGTGKG 480
  481 AENGVLIKSG DALETTHKIQ TIVFDKTGTI TEGKPVVTDI LVADSALSEA ELLTLAASAE 540
  541 QGSEHPLGEA IVGAAKERQL PLAEGSDFSA IPGHGIRVTV NERVLLLGNI KLMKEEAIEL 600
  601 STFVQQADRL AEEGKTPMFV AKDGSFAGII AVADTVKDSS QTAIARLHKM GIEAVMITGD 660
  661 NKRTAEAIAK QVGIDRVLSE VLPEDKALEV KKLQAEGKKV AMVGDGINDA PALAQADVGI 720
  721 AIGSGTDVAM ESADIVLMRS DLMDVPTAVE LSKATIKNIK ENLFWAFAYN TLGIPVAMGV 780
  781 LHLFGGPLLS PMIAAAAMSF SSVSVLLNAL RLKGFKPSTV KRTSGSQK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle