YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|229549833, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVKKAVIPA AGLGTRFLPA TKAMAKEMLP IVDKPTIQFI VEEALASGIE DILIVTGKAK  60
   61 RPIEDHFDSN VELENNLKEK NKTDLLKLVE ETTDVNLHFI RQSHPKGLGH AVLQAKAFVG 120
  121 NEPFVVMLGD DLMEDKVPLT KQLMDDYEQT HASTIAVMKV PHEDTSKYGI INPEKEIEKG 180
  181 LYNVENFVEK PKPEEAPSDL AIIGRYLLTP EIFDVLENQK PGAGNEIQLT DAIDTLNKTQ 240
  241 RVFAREFKGE RYDVGDKFGF MKTSIEYGLT HPEVKDNLRE YIINLGAQLA KKEQPKEK

Type	Start	End	Confidence
Signal Peptide	1	25	0.88
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	298	0.99