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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29540679, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKFLVFVL ILFSLVAAPL LYAEDLVQVY CQALASDPTF QKAHADWLSA RQNLPIAMSG  60
   61 TGTPGSGLFP YVDITAGLDR TFQRIEAGSS SVSGYFNQHN YQVTVTQPIF NYATWKAISS 120
  121 ASFSVKAATA TYIEAAQDLI FRTAKAYFDV LDAYDQLQFT LAQKESFYHQ LVTAQEKFKV 180
  181 GLIAITGVYD AQASYDQAIA QEIQDRNNLD NQLENLRAIT GQEYRSLTSL KKSIPLVIPH 240
  241 PRNIDAWTAV AERQSFAIQS ALYTMLAQRE TVKETAAQRY PTLTGTFSYG AQQRGFPPSL 300
  301 SGPPTTGEFL DTTTTTATAG LNLNFPVFQG GFVTHSTRQE EYNYLSASDQ LNFTHRDVVR 360
  361 QTRQAYLGVD SGISKIRADR QAIISAQNKL EATQAGYVVG TRTMVDVLDA VTSLYQAQQQ 420
  421 WATDRYSYII NIITLKQQAG TLCPHDLAQI NTWLGKAVRF DVEKPVNAKV FTPSTTLPHT 480
  481 VKHVHSPKGV QRATRSHRPL IKASRHHTSP VHSASHIETV HAHYTIQLFA SRTLAEATAF 540
  541 KNKHRLHDLR IIHQNGWYKV LSGHYSTRQA ATIALHRLPS SLQKLKPWVV RVPKVQSTSI 600
  601 KPLSLQKKAT HLPPPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle