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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29541710, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRIAVFILT LSFFSISYSD KNPVFQEYYE GNYRAAETGL KQLAEKNNGE ATFYLATMYM  60
   61 NGFGVRRDFE KGFDYMTRAA ELKYLPAQLY LGNYYFQQQK DLEKAVPWFK KAADAGDAGA 120
  121 QLFTGISYLN GYGVKKNIDI ARKYFIRAAQ NEIPMGQYEL AKIFLASRHA GDRRMGRIWL 180
  181 TKAADKYNYP DAQYLLGTML YTGNEAEKDP VKGVEWLEKA AANGSKEASK TLDKINRINT 240
  241 SDAKANSENR SEPTPWQIMV GLMQKAGVQL NNPITVTASI NNFTKTPKSM ALDKNSIIKL 300
  301 NLNLVNSKDI PPEKILSYMT QLNYKEEKFD LTVPAYPFEM PPGANNYKEA FQSLSRVANY 360
  361 GYAQSLFRLG QMYENGLGVQ KDPETAFQLY MKAAEQNYLK AQYAIGTYYL QGKGVPQDYE 420
  421 KAISWFIRAA LKGSLQAQFV LGNIYERGIK ASNNKILFKN FDRAKAMYSL AVGGNLPIAA 480
  481 YRLAELYVSG FLNPDNNVSL ETQNWKKAYA LYQKAAKSGL EKADVALGYF YLQQNQTTLA 540
  541 EKTFEIAQKA YQTNDPEAAM LLAILYDRGF GVNRNSRKSA EILEKLSKQN NAIAQFMLGN 600
  601 YYLKNKRKEN IAISLLEKSA NQGNGYAKYN LAILAKQNKY TKPGENFLSL LIRAANHYDK 660
  661 IKEILADYYL LDTPVPGSEK KAVAIYQELA NKQDPAAELK LGFMNEHGLL FPKDYHKAEE 720
  721 WYQKSAEQGN PIAQYLLGNM YYLGRGVDRD VNKAIDWLKK SAAQNYVPAK VGLGFIYEMS 780
  781 KHNYPEAKKW YTLASKFHNP QALYNLGLMY EYGKGVKSDP QKAFRLYKDA AQNGLDLAAV 840
  841 QVAGMYLKGT GIGFDPNTAL KMYSQAAQKN NSFATYQLGL MSESGVAQKI DLNKARLYYE 900
  901 KAAKEGSVEA QLALARFYEF GISVPADISK SINFYQAAAA EGNEFAKQQL TRLSNQGKSS 960
  961 SNAMPFQCVN QVALEKVKNS FWKKVTDWIA PVPNIDYMNA IDYLNSGKVE QATTALQKII1020
 1021 KVRPNFQPAR ETVSHYFCQK ADRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle