YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|161761680, gi...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIDAEQLAL QKNNLYRDNY RRVMAFLLAS VVITVSLLAV LSYQIITTPK PAYYATTTTG  60
   61 RVIPLQSLDM PVVTNTYLLQ WAALATRAVY NLDFENYTKQ LDNASSYFTP TGWESLTNAM 120
  121 KSSGAIDSLK NNKLFMAGIV NGPAVILDQE VVHGRYSWRV QLPLLVTYTS ASIQQKAHFI 180
  181 ITMDIIRVPV IDAAKSIQIN RFSAVRG

Type	Start	End	Confidence
Cytoplasmic	1	22	0.87
Transmembrane Helix	23	43	0.90
Non-Cytoplasmic	44	207	0.81