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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29897241, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLTAVVVP VLAMSVALTA CSGSGGEKKT TTTSNNGEEK KSDIKYAAKQ VLNRTENQEI  60
   61 PTMDTSKSTD TLGAQILGNT MEGLYRLDKD NKPIPAAAES STKSEDGKKY TFKLRKDAKW 120
  121 SNGDPVTAKD FVFAWQRLLD KNTAAEYAFI AYYIKNAEAI NKGEKPVTEL GAKAVDDYTL 180
  181 EVELEKPVPY FLNLLAFPSY YPLNEKFVKE KGDKYGLEAD TTVYNGPFVM SSWKHEQGWQ 240
  241 LKKNDKYWDK KTVKLEEINY SVVKEVATKV NLYDTGSIDF TLLSGEFVDK YKSNKEEYGE 300
  301 YAESSTFFLR LNQKRNGQDT PLKSKKLREA IALSVDKKGL ANVILNNGSK ATDQLVPKGL 360
  361 ATGPDGKDYQ DTFKNGLKYN PKKGAAAWEA AKKELGKDQV TIELLSYDDG TAKKIADYVK 420
  421 DQIEKNLKGV TINTKIQPFK QKLKLETAQD YEISYAGWSP DYADPMTFID MFESKSPYNQ 480
  481 MSYSNPKYDE MVGKAGNELM SDAKKRWETL GKAEKLFLEE DAGLVPLYQT GRSYVMKPNV 540
  541 KGIVKHNISP EYSFKWAYVT EDGGKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle