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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29897242, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKKQMKKLT AVVAPVLAMS MALTACSTSG GDKKTSTNSS SSGDSKSGEK LAAKQVLNRT  60
   61 VTQEIPTMDS SKSTDTVSSQ MLGNTMEGLY RLDKDNKPIP AAAESSTKSE DGKKYTFKLR 120
  121 KDAKWSNGDP VTAKDFVYAW QRLLDPKTAA EYAFIAFPIK NAEVVNKGEK PVTELGVKAV 180
  181 DDLTLEVELE QAVPYFLNLV AFPSYYPLNE KFVKEKGEKF GLESDTTVYN GPFVLKDWKH 240
  241 EQGWQLKKND QYWDKKTVKL EEVNFSVVKE AATLVNLYDS GQVDFALLNG EFVDKYRSKK 300
  301 DEFGTYSQVS TYFIRMNQKR DGQDTPLKSK KLREAIALSI DKKNLANVIL NDGSKEADFL 360
  361 VPKGLATGPD GKDFQETFKN GLKPNPKKAA AAWEEAKKEL GKDQVTIEFL NYDTGNAKKV 420
  421 GEYIKDQIEK NLKGVTVNIK LQPFKQKLKL ETEQQYDISY GGWNPDYADP MTFLDMFETG 480
  481 HSHNQMSFSD PKYDGMVKKA GTELMSDAKK RWEELGKAEK TLLEEDVAIV PLYQRGDSYV 540
  541 LQPNIKGVVK HNISPEFSFK WAYVTEK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle