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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|229112450, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFQIKKAAVL GSGVMGSGIA AHLANIGIPT LLLDIVPPAL TKEEEAKGLT LEHKSVRNRF  60
   61 SNTAVQKLLK QKPAPLTVKG NLALIEAGNL EDDLERLADV DWIIEVVVEN LDIKKKLFEK 120
  121 VDAVRKPGSI VSSNTSGISV EKMAEGRSDD FQKHFLGTHF FNPPRYLKLL EVIPTKETDP 180
  181 QVLSFMKLFG EDVLGKGVVI AKDTPNFIGN RIGTYGLLVT LQEMVKRGYS IGEVDSVTGP 240
  241 LIGRPKSATF RTLDVVGLDT FVHVANNVYE NVQEEERDVF KVPAFMHDML EKKWLGSKTG 300
  301 QGFFLKQGKE ILELNPETME YEARKKLKAA SVELSKQEKG LANKLKALVY AKDRAGELLW 360
  361 NIITPTLLYS AKLHKEIADD IVAIDQAMKW GFGWEQGPFE VWDAIGVEKS VQKMEENGVV 420
  421 VPTWVKEMLE KGFTTFYKHD NGDSYYYDNG EYKLIERNKK AISLKQLKAK NGVLKKNSGA 480
  481 SLIDLGDGIL CLEFHSKSNA IGMDITQMIN YAVDEVEKNY KGLVIGNQSK NFCVGANLAM 540
  541 ILMEAQDDNY FEIELVVKNF QDAMTKIKYS SKPVVAAPYG MTLGGGTEVC LPAASIQASS 600
  601 ETYMGLVEVG VGLIPGGGGN KELYIKHLNK MANGVEFDLQ KVANKVFETV AMAKVSTSGQ 660
  661 EAVSHNFLGD KDGISVNGDH LLYDAKQKAL ALYEAGYKAP IRKKIPVVGE TGYATLALGA 720
  721 EAMHLSGYIS EYDLHIAKKL AYVIAGGKVP YGTEVDEQYL LDVEREAFIS LVSEMKSQAR 780
  781 MQHMLVKGKP LRN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle