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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32403284, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTDYAYDEE GHLWPFFVFT LTSIVTVPIT YSLIKSSRND PAAALKRIQT DYKHDQSAVV  60
   61 DTLRKSEKRK DGSKPWLIAL VIAGWAVMGY MIYLIKTTDA PVQHLWNPYD ILGIAESATE 120
  121 KQIKKTYKML SLKFHPDKAR PDASKNETID DLNRRYVEIS KAYQALTDED VRNNFIQFGN 180
  181 PDGKQGFSIN IALPKAIVSD GNGKYIVLIY FALFGVLLPY LVGSWWYGTL RRSKEGVLME 240
  241 SANRLFKEYQ DNIDEGGVVA ALSSGQEFED LFKGDKADAG LSKIESKVMA SDELPPKEKK 300
  301 KLEDVENGPR RKALALLWAY LGRIELGDAT LEKAKFQVAP IAHALNKSFN AIALAYMNTA 360
  361 PLLASYFASQ RLIQAIPPKA SPLYQLPHFN SAVVRAVEGD SRVHTTVQAF MDQPDAKRRS 420
  421 LVVGKGLLTD AQYKETIAYA KQLPYLRVAK AFFKVTGEKF IIPSSLVTLV VKGRFVPPGS 480
  481 EKVPDVTPID LEDIDPAEDD LDAILGRKKT KKVVGKDEKG KPIYEESAES EDVYPPLASS 540
  541 PYFARDHSPR WHVFLTDSKQ GRVAVPPFTF VSFDRPIYES DGKTPTFAMQ TMKAQFQAPP 600
  601 QAGHYTFVMH VVCDSYVGFD TKMEVTLVVE DASRAAEMKD EEEISEPEED SIAGIMNAAK 660
  661 GAPTKQRVVK DEEDSDEESG TDDDEDDDTS DTNTDTEPEN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle