YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33595902
Protein type: Globular with Signal Peptide
Type Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDLKSI LIIGAGPIII GQACEFDYSG AQACKALKAE GYRTILVNSN PATIMTDPET  60
   61 ADVTYIEPIT WQAVEKIIER EKPDALLPTM GGQTALNCAL DLAHHGVLKK HNVELIGANE 120
  121 HAIEKAEDRQ KFKQAMTDIG LESAKSGVAH SMDEAWEVQR RIAADIGTAG FPVVIRPSFT 180
  181 LGGSGGGIAY NAEEFEVICR RGLEASPTKE LLIEESLLGW KEFEMEVVRD KADNCIIVCS 240
  241 IENLDPMGVH TGDSITVAPA QTLTDKEYQI MRNASIAVLR EIGVDTGGSN VQFAVNPQNG 300
  301 RMIVIEMNPR VSRSSALASK ATGFPIAKVA ARLAVGYTLD ELRNEITGGA TPASFEPTID 360
  361 YVVTKVPRFA FEKFPQADAR LTTQMKSVGE VMAMGRTFQE SFQKALRGLE VGVDGLNQKT 420
  421 TDREKLQIEL GEPGPERIWY VGDAFAQGFT LDEVHGLTRI DPWFLAQIKE IVDIELALEQ 480
  481 KTLADLDYAI LWELKRCGFS DRRLAFLLDS SESEVRKLRH QLNVRPVYKR VDTCAAEFAT 540
  541 NTAYMYSTYE EECESQPTDR KKIIVLGGGP NRIGQGIEFD YCCVHAALAL REDGYETIMV 600
  601 NCNPETVSTD YDTSDRLYFE PLTLEDVLEI VHKENPVGMI VQYGGQTPLK LARALEANGV 660
  661 PIIGTSPESI DVAEDRERFQ KLLNKLGLRQ PPNRTARTEA EALAHASEIG YPLVVRPSYV 720
  721 LGGRAMEIVH EQQDLERYMR EAVKVSNDSP VLLDRFLNDA TEVDVDCLAD GQTVFIGGVM 780
  781 EHIEQAGVHS GDSACSLPPY SLSAEVIAEI KRQTTMMAKA LNVSGLMNVQ FAIQGGDVYV 840
  841 LEVNPRASRT VPYVSKATGL QLAKIAARAM AGRTLADQGI TREVVPPYFS VKEAVFPFVK 900
  901 FPGVDTILGP EMKSTGEVMG VGNSFGEAFV KSQLAAGVRL PDSGTVFISV RNQDKPRAVE 960
  961 VARGLHNLGF KLVATRGTAA EIEAAGIPVQ VVNKVTEGRP HIVDMVKNGE VSLVINTVEE1020
 1021 RRNAIADSRT IRTQALANRI TFFTTIAGVR AAVEGMQFMR QGLGLQVYPL QELHAGLTAQ1080
 1081 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle