YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|33573186
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQYRLCFTS LEGEIFMMSD FALNTSGSKR AKRGAGKLGV SLALAGALLF GSSAAVTAQA  60
   61 QGTKIGFVNT ERILRESGPA KAAQSKIESE FKRRDDELQR LSSSLRSQAE KFDKDAPVLS 120
  121 ESDRVKRQRE LSNLDMDLQR KRREFQEDFN RRRNEEFSSI VTKANDAIKR IAEQENYDLI 180
  181 IQDAVTVNPR IDITDKVIQS LGR

Type	Start	End	Confidence
Signal Peptide	1	60	0.61
N-region	1	51
H-region	52	57
C-region	58	60
Cleavage Site	60	61
Non-Cytoplasmic	61	203	0.99