YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32403368, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSPCSLPLA LPQLLLSHLT TLPAVTPAPL LPPYLSYKYF LPAAATLARK TGLRISMFKF  60
   61 RIASSVCGEV GLAAIEVEVR LVPPVRVLVE ELEPPVSVDR EGITEVDDWE DETREGVEVE 120
  121 AEEEGWGRAE EDEEEGGWCN RRNLMLEAVR KQEMYEVKKR STSLRYLDKG YGRYSSQFGG 180
  181 RAWLLELEVP SVTDDANAAG APVCPSAADS ARTAGCAKGS TGNANHVAAN RKIPWRMSKF 240
  241 QKLRQRRRLR AVDNVVATIE NALAKKGETV KAVERWRAEM PTEAEMLPKD KYTIFDRKEK 300
  301 RYRKGIHKLP KWTRVSQRVN PPGY

Type	Start	End	Confidence
Signal Peptide	1	23	0.96
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	324	0.99