YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28918346, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGLWNTLTG GNKKQQEQQE PAAPAPSAPQ TTTTTTSAPS YPSPFDASQP QGVEAFLGSS  60
   61 SFADPTQLHP LAGLNKETLE YISLEDTPLP DAAGASVLPS RGFTDDLCYG TGITYLTALT 120
  121 IGGAWGLKEG LQRSAGQPPK LRLNSVLNAV TRRGPYLGNS AGVVAICYNL INAGIGYVRG 180
  181 KHDAANSILA GALSGMLFKS TRGLKPMMIS GGIVATIAGT WAVARRTFFP SPQTNEVD

Type	Start	End	Confidence
Cytoplasmic	1	203	0.71
Transmembrane Helix	204	224	0.87
Non-Cytoplasmic	225	238	0.78