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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85081304
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.33
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWDKLSITR PHLVYIILGG FTSLFMLCSS IIKERMYIGE ATVATLCGLI FGPHAAGLID  60
   61 PIEWGNIDIV TIEFSRLVLV VQCFAVGVEL PKFYMEKHWR SVTFLLIPVM LWGWLITSLF 120
  121 VWWLIPPLSW LDSLVVAACV TATDPVLASS VVGKGKFAKR VPKHLRDLLS AESGCNDGMA 180
  181 FPFVYLSLYL ILDHREARDV SFHWIVFTIL YECVFGAIFG FMVGYIARHG IKYAERHELI 240
  241 DRESFLVFYF VLALFCAGSG SILGVDDLLV GFAAGVGFSN DGWFTNKTEE SHVSNVIDLL 300
  301 INLAYFVYLG TIIPWEQFNN FDIGLGAWRL VVLAIMVILF RRIPIMMALK PLIPDIKTWR 360
  361 EALFAGHFGP IGVGAIFVAI LARAELEHED PVPLADISNI NPNNPHFHLI RLVWPIVTFL 420
  421 VVSSIIVHGS SVAVFTLGKH INTLTITMSY TQANEDGPSW MNRLPRITSV SRSQARNMSD 480
  481 TEDDMKMPEF PPGTLPPTGL PGTFLRRQKE EDKGTGRHAG SRSSSANGRR RRKRWDDGIG 540
  541 PGGPISQSAI FPQRRSQSEQ AIASPHDEMS LEPSDTARLS PSDALTTRRR SVRKSEKERS 600
  601 SDETASPYEP SPTSEQRDQE LEYYDEGDHV IVEDREGNVL AVESPATGEG QNPVEALKEK 660
  661 LEAEAGPSGW SYDALKKKIQ NWRDEEAAKR KEKEKSTRRS EPARAYQFGT TIIVENEDGE 720
  721 VLKKYELPSE KPENDFVSQS LKYMGIKAGD KAQVAGGTAG GEGSATRPSK PTKRPTWASA 780
  781 VVGGGDASKK KNAVEEQEED DRHIRFTIGG VGQRMNKEDF IREMQKLDKS TRKEIVDQSN 840
  841 ASSAVKSLAK ADLTPKQLQQ PQQQQPQPVQ RRGSPAGSVK SSHSKDSLTR QGRPEKSEMM 900
  901 SGGSNAERSE SPSISRSRSR SRSRSPSPLT AEGGSAAPSR DVPETAAERR RRLAVLQSVG 960
  961 DDGEGEQGET PAERRRREAA LGMFPGAAED EDSEDDDTPR IPPPRRGIRF AEPTRRVT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle