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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|85078501
Protein type: Globular with Signal Peptide
Type Confidence: 0.27
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDTTAFPVL PPAAAAPSKP QPTQPASGST QGPSSTTQSQ LPLTKKLRPG APNPVSLNEA  60
   61 ALDSPTFRAS TVHFSENLDV IERWLDNYIR STSKVVNDLL ALEDSIHAYL QKIAPPPVNA 120
  121 TAQADAIIDT DYTFLALRRA GDGARDWWTG VMATVRRLEP VSVEPIRNFV NGELRTFKEA 180
  181 RRALEAAQKT FDTTLARYVS QNKTKEPSAL REDAFAVFET RKAYLKASMD FCQSAPQLRF 240
  241 ALDKLLVRVC ADMYREMRRS RGDAPLGAAT AAEELERIRG WSKEMESYEP LFKRELQAAR 300
  301 KEVGEATLAV YKPSREIEDY SVSTVPYLGS RGPMNMQQKD QTDVIAEKQG WLFLRVVSGK 360
  361 PARTTWVRRW YYCRNFQFGW LMNGPQGVLQ GDEIGVLLCS AKPAVQEERR FCFEVKTKTQ 420
  421 TLLLQAETQT QLMEWLEVFE VAKKRAFEAT MGREANAVSG GVDPAFSINP STIPEFSAKS 480
  481 LDSVEGDGPG PGLERTATLA VPGADAAARA SFDAAANPPR RSITTTLARE EGESGREHAA 540
  541 RLMQRLDLHR KAMLANSDTQ AQSSGGIANL INASHGLIGN SPISPIAPQT PAVRVPIPSL 600
  601 GGPFDHAPTS LAPATLSKPP VPTNLSRAAV MASATADINR GLPSAVLANY WGSNPWASSF 660
  661 TPLPETVRTP KVDLDDPLVG VVQPKAPGTT SDKASTASLH KKTLSVDAAS DAHGKIQEKH 720
  721 GQLVDSFPAN YPPELRAQYA QFRLVFPTVA PEEKPVLVFN AAWSNSSGEG KEGRGMAANG 780
  781 RIFVTPDNMY FFGHQLGLVV AYAISLDSIT EVTAAPGKDC DYIFLHLNQD ASDLNISRIT 840
  841 MKIFLEDFTL LHARLNLLVD DLQAAEPMSL EEIITALVNL EGESFDKRSP SAESWEEVAS 900
  901 NTPMDDGTPQ GRPVQRRIGD LSSRFVRGAR GLKKAPMHKF QLPAHPVYFE PEDMGKPVAE 960
  961 RNFEISAKAC FHVLFGDKSF IFPKLYFERR AKEIAQGPWE LKDHGGKMAR QFKFKVDKAD1020
 1021 MLGRKTDANI VDTQNIDIFN DHITYVVTHV KTPWHLPHSH AFKLITKVVI THVAKSKCKL1080
 1081 AIYTKADWSK APAIAKNMVE RQALDDAAND AEELAEVATD QVRRLGPHSR TKRAIQVYGN1140
 1141 IGQQTQVVVF SPNAGFDGSG AASGSKKGQP IRVRSLTAMI LETGRSLLES AITSVMMWAF1200
 1201 AVVKKVFKII TAHRVLLVLL MASAAYNLVV VSQSGAAWWA ERKAARYMER IGVGPNTVMS1260
 1261 KAIFLADLEE AAKGSAVVVE RPVGSQCYET FQSIVNSTDI DAPYTDAGAG FASATGKATA1320
 1321 RRLRRTRQRL GTYRHDLLVA MRVVNGIERE MIQSEWENWL ADENLRCEQE TNGGDNEEAT1380
 1381 TSSDGEQQQM TRRDALKKWY AEYCGACEAD QRALWEGKKM RQVEMSPFIG 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle