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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32403982, gi|...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRSPTPSIP LRMVGGHPLP ANGMRPPPSP SYESAPYSFK LRVPPRLCPA RQLDSSPATN  60
   61 TGGVQSARYQ PHSPFPHPST SEVHHTISRA DRAPSRPHRD YHPNREFETN IPGLDLREVQ 120
  121 HIKTRTKAPS SGVQNHHHQS QRHIHSYSRS HRPCDNIDHK IKDPVPMYGV ALVDDRGGVE 180
  181 FLATDRMDDW LAGVENDDFI IYEDPVEHGP DKNDTELSGA EPQTDESGLA STVVRYAMME 240
  241 IEDGGDSDKE NQNDAPKYRR IRKPTPIKPT ILKEIKLNQV KTEIVKEDDA KTIWPKVDDS 300
  301 MLSVLKRRSI KRHAFVQDSQ ADTLEPPASK RSKLTNTLKR GLSKMSLRSI RSSRASKRAG 360
  361 TPSVGTREAL SRLSSWSWVP GSEKLRSVSG SSGQERKIKI CLVGDANAGK TALANRLVSG 420
  421 EFVEDKISDV TSQHSPITDH QIPTAPSSHA TDYHSFSIIA DDGKLVTIEL WDFPGNIANE 480
  481 RTTQLASNFF QAAIICYSVE DVKNIPSICD TWKPKLDRSL IDCPRFLLGL KKDLRPAFPP 540
  541 LGLSFLPRKE PVMADMGRSA AYHSRVAGYG ECSAKTGENV DDAFRGIVNF TLSHMRKKEI 600
  601 GIAHGKRRDK AKETVKDAGK VMVDALCGFP NGPTPGLRFS ASLPDLHLDI PSPNRTTIVA 660
  661 LKHRIRERLL SSSKDSKDET TVKAARSRLR FIHAGKILPD SAIVSSVLRP PPPPPMIMDT 720
  721 KGKGKAVDRQ QQQQQQRVYV NCSIGDELTD EELATEAAAA AFVPVPVGSV DSNLSGTGSG 780
  781 AGGGKTSRTT GLQPSSSSSS TGESRSRINA SAGQATTTTT TTDRNHPRGF DRFLSAGFTP 840
  841 AEVNQLRLQF TSIQASRFTP DTMPSPDTLR SMEDAWIDNN HGGVGGPGMV ESDDGSGMVP 900
  901 EPIGAETDGF NGMVDTLVKG MFIGFVFPLG AIAWLLREEG MLSKRWRVSI AFGVVFGFGI 960
  961 GLLRVFSSDQ 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle