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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28922656, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPRASRPHG VEVTGLLHVT NLTSGSVEVP QPPSMTQPDV FDIARSRTAD ALWLKIAWLG  60
   61 TGKTGWRRYS GPCFTKPGTE PCRPRRVPGS STFQNLRWDS KQDAACWAPT TDDRTASKLQ 120
  121 YPPPPRWTIS LSCDSRHSTD PSHWLPDGHS TSSSPFPKSV RCSPRPEPRS TKLKTSTMSE 180
  181 HLRPPISAPS HSPTLHATDV KYDQQDPEED ITIGTRTPKP YCRQSSELLE PSERLLHRAA 240
  241 TVALSQRQPS PTSAHNSNPA SDSGTEADDE HFLKGLPAPK TRSHKGLRGK NEPLSGTSTP 300
  301 LLSPNAPDEN GRGPDLNSRS GFSIRLKRSE AERARRRKEV VRRVITSANT FPPELSALGW 360
  361 LFSTLLALYP LRLVAWAYRR GNPSNQLPLS VPTSFDPAPA LYPQLIPLFV SLLVAPNVEG 420
  421 VVLPNVILSI CSLPRPLIPG AGYWEEFSST QWLLSCIPLV AGGSATDPEI LTLLYPLHQT 480
  481 LCLLLQQLTT TSLLIAELQL LSVALINVLL LARSPQVVIL KALLWGGGLG IIALCGKVIQ 540
  541 WGISLARVPK WRFKRPSVSK SGSTSGFWKF FRAAKRTYYD GKTDNEEVLS DSDHVVSGHN 600
  601 RNRSSATPSW DLSFLKGRTR EESITSAEEN SLRQANGADV RFDVQEPPSP QQPSSRRHTL 660
  661 PSLGRITSIV RSQTTPSGRR KRSASSSVRA FFSLTQGQAA VRKWLYAGWV YACILVVILV 720
  721 GVRECVGRYA LAGQEPVGWA LGYLFGDIPE FRLEVVKAGL ERWICLPIRA DGEASGALGG 780
  781 WVQLVRQSVF GEANTRLLLS GYWLVIIIIG LAVVFRLSPF YEVDTRRKVF HFMMVAMFLP 840
  841 TIFIDPTYIA LALSIVLAIF LLVDLLRASQ LPPLSTPIAQ FLTPYVDGRD LRGPVVISHI 900
  901 FLLIGCAIPL WLSLAALPRI GEGPLAGWEV PLRDISMVAG VVCVGLGDAA ASLIGRRWGH 960
  961 RKWLWGGGKS IEGSIAFATA VFVGLMTANV WLFVGGWPST VGMLSTVARE AELNDGFGSS1020
 1021 EGAAAGVGEL AMDIIGKLWE ALSQLPKASW SATVVKTAYG HEFEVVPEYD TPAYYRRRDR1080
 1081 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle