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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32405286, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLQGRDIAL AAIAAFISWG YAVHWFPAIR WANYAFAAGV LVTLVGLLAL LMLTSRGSHH  60
   61 HRLRPPPRPH GAAFVAPGSW SKEVAALRAR QTSTKAPLYP ESPKVSAALD EVLGYVIRDF 120
  121 IQVWYSSISK NPVFTDEVDK AIRGAILTVR DRLAQLDLAT ILTTRLVPIL TAHFRDVYEA 180
  181 EKSVRGRKLN RSVTETDELD LAIASKYRDG KLHPAATLSF SDTKTTQQDY LRKVMVRILP 240
  241 KILPKSMLAS GAVSAIVREI TACAVMFPIM RMLSDPDTWN QLMENYGRSM LQDRSTVRKL 300
  301 RAALDQHASP APRVNKPVAF PRMIPGDNER KFEKFIRAIR KTNNLSDARR FRSEVAIQIK 360
  361 RDSQQENVDQ VYLRRLEMGK RLLDQKVHHL AAGGDRRALP PQTTALPTPT VSRLENASLT 420
  421 DVLRDPSSLS YFMEYMDRQR LMPLVQFWLV VDGFRNPLED DGPEGEQLPL QLPPWTDSDR 480
  481 LDLAQIEAAY LSRPELKVPD SSKRTIQEFL RAGRRASPEQ YYKARRAVLR AQSAVLEEMK 540
  541 AKHFGNFRKS DLFYKALASE EASKSMVAPV SGSSTPGPSV ARASSFTSKP NPQLRMALRL 600
  601 PPGARNRGAG SSLDIRAGTQ SIDALMGTRR SMEDDSSITP MFDDDDLGED GLADSVQSLE 660
  661 QEPAPPVPDT RVVQAMEQAL NNIMEDSQPP TAEDLRASLF GDDGNNSSLF SSPLKSGPLR 720
  721 AMSATPRSNH GSVDLGRPSR GSADMPRPMT AKEPEKPSLA SLGLVSAASR IGVFIDDDLF 780
  781 ADENRFLSDE HEYSDENKDD DEIDEVHEAA PGDLGLAEAI TVLSNDIDRL VAQDAVVDSL 840
  841 LKKAELTNNT AELRILRKSK ASLQREIRRK ELQRQQYVIQ ESDNSLYGRS TIKIKNIHVG 900
  901 REEDGKEFAM YAIEVLRNAG EKMPAATWTV TRRYSEFLEL HQKLRSQYSS VRNLDFPRRR 960
  961 MVMKLQNDFL QKRRVALEKY LNQLLLLPDV CHSRELRTFL SQSTITPTTA THGQTSSLED1020
 1021 SKKDMMTRLY DSVADGMEDI LGNIPVLDQL SLAGQNLLAA ATNQQLAAAS AAGAGGDDVV1080
 1081 TAAEAEAELN AFELTNDKEL EPFVKPICDI FLEVFELNRG NNWLRGRAVV VVLHQLLGGT1140
 1141 IERKLRDNVR MLVAEDALLR YINLVKDGMW PSGELASNKP PRTAQEKART KTEASLMLAT1200
 1201 LVPDLAASVV GRLNAQAASR RIFATFNNER LK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle