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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|32405742, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSTSTSADA FAGQGDNILR PRPRKPLHTQ VSQLSHDANG DSDHANGTGA TSVTGVSSGR  60
   61 STPIPSDAPP SIQSLSTARK QVRAEQRRRI FPTIEFASRV SHFDPNSDYR DFHGFFNLFW 120
  121 IGLAIMAITT CLRNIKDTGY PLRVQIWGLF TVKLWHLAIA DFLMVATTAV SLPLHKVFRA 180
  181 APAGGVLTWA KGGMAIQSIY QAIWLAVWIV IPFWLEWTWT AQVFLLLHTM VLLMKMHSYS 240
  241 FYMGHLSETE KRLRALDDPA TASKAPAYLY PTPENPLGTV ASPKQRAVEA AAEASSKETE 300
  301 EISTPNEDEE ITQLREDLAR ELTSPMGNIT YPANLTWANY LDYLCCPTLC YEIEYPRTAA 360
  361 IDWQNLLSKV LAVFGCIFLL TVISEEFILP ALTDASIRLD PTLRAAAGDS GPLTALEALL 420
  421 VLAETISWLL FPFMLTFLLV FLVIFEYVLG AFAEITHFAD RHFYSDWWNS TDWMEFSREW 480
  481 NVPVYNFLRR HVYSASRPHV GKANATVITF LISAVGHEIV MACITKKLRG YGFICQMLQL 540
  541 PIVMLQKTEL VRGKKTLNNV CFWCSMILGL SLICSLYVLV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle