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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37523747, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPACARNCSA SATRKPREVP VPLRYPFVIV SAPPSSAKNY RWNRVNYSRT RRVIDIWGFF  60
   61 LLILFYRWWD SKKWTYRSGD SEENRSRRQR MRAIWTRETM LELGPTFIKV GQLFSTRADL 120
  121 FPKEYIEELS RLQDEVPAFP YEQVVEIVED QFGKPIPQVF QFFDPTPIAA ASLGQVHRAQ 180
  181 LHSGEDVVVK VQRPGLEKLF NVDLGILRGI AQYLQNHPRY GRGGREWVPI YDECARILMQ 240
  241 EIDYLNEGRN ADTFRRNFKD SPEICVPRVY WRYSSPRVLT LEYLPGIKIS NYEALEAAGL 300
  301 DRRSLARIGA RSYLQQLLND GFFHADPHPG NIAVRHDGAL IFYDFGMMGH IQPGTKEKLM 360
  361 DTFLGVAQSD ADKVIDSLIE LGAIKKSADR VPIRRSIEFL LTNFVNQPYN LQSFNFAELT 420
  421 DDIYEMAYEQ PFRFPATFTF VLRAVSTLEG LGKGLDPDFN FMDVAQPFAD QLMAVNSEFG 480
  481 MRELFNQLGQ QVGQVSSMTV NLPRRIEQTL ERADRGELRV RTKSIETERL LKRLNSAAIG 540
  541 GIYSVLLAAF LICSVVLYTA DHILEAIAAF GLAGLLSFAL GRVLLRLQRI DTDLQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle