YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TVP18_NEUCR
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKDEFATR NFSIYGQWLG ILSMILCFAL GIANIFTFRP IIIVFSVITL CFSFVILFVE  60
   61 VPLLLRICPT SPTFDNLIRK ISTNYTRAAA YGVMAVVVFL SCIDRTTSLL VPGIFLSFTG 120
  121 ICYALAALKG QAFVGSKTLG GAGVAQMIV

Type	Start	End	Confidence
Cytoplasmic	1	13	0.91
Transmembrane Helix	14	35	0.92
Non-Cytoplasmic	36	40	0.76
Transmembrane Helix	41	64	0.91
Cytoplasmic	65	83	0.88
Transmembrane Helix	84	103	0.90
Non-Cytoplasmic	104	108	0.74
Transmembrane Helix	109	128	0.87
Cytoplasmic	129	149	0.80