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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|39983914, gi|...
Protein type: Transmembrane
Type Confidence: 0.88
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATCVTVLIL AFAGFVVRDL TMEPPELLRR LEIIAGVVGD KSMTSIVFND VRAASEMLDV  60
   61 LKTDPHIIVG RIYLKDGSIF AHYRRKGSLA SPAANSSADD ATTWIEYRQQ MVEKMGDSLP 120
  121 SHHWHGDHLD MFRPIILDGE VIGTVYLRGD YREIYSRLRW YAVSGGVLLL MLSAFAYVLS 180
  181 SKLQRRVSAP IAELLEVTRR VAEEHNYSVR AAGGGVDEIG ELVSGFNRML QIIEESDANL 240
  241 KRNREDLGEE VARRTEDLSR TNEELERAVA DLSKAKEAAD SASQSKSRFL ANVSHEIRTP 300
  301 MNGVLGMVSL LLETDLQAKQ REYAEIIRSS GELLMQVIND LLDFSRIESG KLKMEQLPFA 360
  361 ARRVIEEMAT IYGERARQKG VFLEYSMAGE VPDRLLGDRH RLRQVLGNLL DNAVKFTLKG 420
  421 TITLTVRGSV EGGVCRLSCI VSDTGIGIPQ DMLPRLFHPF TQADDSNTRR FGGTGLGLAI 480
  481 VRHLVELMGG TVSCDSEPGC GSVFRFTVAL SVVPDTGEPE PEPSHEAAGS FPSRLLLAED 540
  541 NAVNRMVLQE MLRSLGADVM VVSDGAEAVA AVSAERFDMV FMDCQMTGMN GIVATAEIRR 600
  601 MERTGQLTGR THIIALTGRV EVGDREACLA AGMDDYLIKP VMRHDLVMVL RRWLSPHDET 660
  661 MPSAAYDKAP GGVSEEAECL LDRDILDGIR ALEAGGSEGL LDRVIDIFIS DSPRHLRDMR 720
  721 EALARENLPA ARRAAHTLKS GCLNLGAVAL AALCGEMERL GEGEDVLPLR LLSRMESEFI 780
  781 RVCAALERER TGV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle