YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39983973, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLKFLICAL SLLLPMLAWS ADYVIGEGDG LDISVWGVKE LNVGVKVRPD GKITIPGLGD  60
   61 VVASGFTPAQ LQADLAHRLK ELVKNPIVTV TVREITNSKV YIFGGGVQSG VVDLNRRTTL 120
  121 LQLLCSIGNV GAGDGKGGGS AAGPSTKVAD YRKAYVLRNG KKVKEDFYRL FITGDTSEDI 180
  181 VIESGDAIFI PQAQEKNVYV LGAVTNPRFI EYREGMTVME AILESGGFTK FARQNDTVIR 240
  241 RRDGDKEALI EVKAKDLVKD GDLSQNVKLS PGDYIIVKEG MF

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	282	0.99