YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|39997636, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKGSTLGFI GGGNMAEAII KGLLAGGVAA ADVMVAEPVA ARREYLHGTY GIDVCADNGR  60
   61 VAAAADALVM AVKPQVFRGM VAALGPAGLD GKLLISIMAG ITTADMEEVC GSAARVIRVM 120
  121 PNTPALVLEG ASTLCRGRNA TDDDLFFATG IFDLVGTTCV VEEKLMDAVT GVSGCGPAYV 180
  181 FLFMEALSDA GVKNGLPRDV ATRLAAQTVL GAARLLLETG DHPGVLKEKV TSPGGSTIAG 240
  241 IASLERDAFR GAVMAAVDAA TARSAELGKK

Type	Start	End	Confidence
Signal Peptide	1	18	0.57
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	270	0.93