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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CYCC_GEOSL
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKVTKYSA VLAVSLFAAA LAGCGSENKE GTVGTGPGGV ATVGDTACVQ CHSAVVDPLT  60
   61 GESIITQYTR SFHYSKGVGC EGCHGGGAQH NGVGPLPFPL AGQSEAQIAA RCASCHNGVI 120
  121 APLSSSPNFV NGNHANPFGG EEAKENLCSR CHSHEGAIFG AQAGFTGDGN ILRNAAYQPV 180
  181 YPQDPETFNV MTCATCHQHG GAQRQVFTQI STAGVPNSRR TVAWDPNRNS INDQYDLCTS 240
  241 CHTVNTMTGT LIGSGNVLQI FTSNAVGSGT KSVTTAPFYH NTRWFRTLPS THYDFPESKT 300
  301 TASGTTIEGY VIRRNTANPC FDCHGHEFQT NTRRLAGADR PNTIFLDWGQ SAHGGKLLQA 360
  361 KVAAAALASS GAAEVDDVMK AGATDATAPG WTHYNWDDTA SRGACQRCHT STGASNFLNN 420
  421 PAGYDRTGAG NSFTHLAGWT SSNKRSDQNE LLYCWGCHTK AGTGELRNPG AITEVYPGIN 480
  481 STSTGTTGLD VTVSYPDIKG SNVCMGCHLG REVGDNIKAI TDADGILGFV NSHYLTAGGQ 540
  541 LFGTTGYEYA TRSYANPAFF QHDKIGTAAA PGTGTNGPCA GCHMTTPTSH LFLPVTKDGT 600
  601 GAITAITSTA CVTCHAGTFA LTPEGLTAEE EEYVASLEAL KAALAGKGIL FFNAHPYFYR 660
  661 DTNANGIADP GETVSSNAFT NWAGVYGLAL WQDVMGAAFN ANLLIHDPGG YAHNRFYSKR 720
  721 LIWDSIDFIF DGVLNNDVTA AIDAQVTAAR LDSATATAAK AYLGATRP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle