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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CYCB_GEOSL
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKVTKYSA VLAVSLFAAA LAGCGSENKE GTVGTGPGGV ATVGDSACVQ CHSAVTEALT  60
   61 GESLIAQYQK SSPHNTAGLG CESCHGGGAQ HNGVGPIPFA QPDASRCADC HDGTTAVATN 120
  121 SDTAFAESRH NIQTIRSGAT CRRCHTHEGA VLSNIAGYTG DLATLEDTVN QNKVPLVSSY 180
  181 SQISCATCHE HGGGLRTIKA TNGAAGPVVN WDPNNNRTVD QFDLCTSCHN MYSYNGSTLL 240
  241 TNGVPVNGVA TGTVGHHETT WYRIIATTHF DNYSTGPQAG AGASGTNAKV EGYVLRRTGA 300
  301 NPCFDCHGHE AKTNTRPGRD ATIHTDWAKS AHAGGLLTAK YNAVGALTGA AAVNAAMNAY 360
  361 VDDTTAIAWT HYNWDASSRG SCQRCHTATG AANFMSNPAG YDPTGAGNSF SHLQGWSAAN 420
  421 GSKQNELLYC WGCHTNAGTG ELRNPGAITE NYAGVNSTST GTTGTAVTIS YPDIAGSNVC 480
  481 MTCHLGREAG ENIKAITDAD GILGFVNSHY LAAGGQLFGK TGYEYATRSY AKPTFFAHDK 540
  541 IGTAAAPGTG TNGPCAGCHM TTPNSHSFLP VTKDGTGAVT AITSTACATC HAGAYALTPE 600
  601 ALTAEEEEYV ASLEALKAAL AGKGILFFNA HPYFYRDTNA NGIGDPGELV SSNAFTNWAG 660
  661 VYGLALWKDV MGAAFNANLL IHDPGGYAHN RFYVKRLIWD SIDFIYDGVL NNDVTAAIDA 720
  721 QVTATRLDSA TATAAKAYLG TTRP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle