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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41406520, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFGSELLA AALAGTAADE QPLRHVAELP PRRGRPHDWP AWAEPEVVGA FAARGIKSPW  60
   61 SHQFTAADLA WSGRHVVVST GTASGKSLAY QLPALNALAT DPRARVLYLS PTKALGHDQL 120
  121 RAAHALTAAI PRLREPGFAV APTAYDGDSP TEVRRFARER SRWVFSNPDM IHLSTLRNHA 180
  181 RWAVLLRGLR FVIVDECHYY RGVFGSHVAM VLRRLLRLCA RYASAPTVIF ASATTDSPGA 240
  241 TAAELIGLPV REVTEDGSPQ GARTVALWEP ALRADLVGEN GAPVRRSAGA EAARVMADLI 300
  301 AEGAQTLTFV RSRRAAELTA LGAQARLDEI APGLSAQVAS YRAGYLAEDR TALERALAEG 360
  361 RLRGLATTNA LELGVDIAGL DAVVLAGFPG TVASFWQQAG RSGRRGQGAL VVLIARDDPL 420
  421 DTYLVHNPAA LLGKPVERVV IDPRNPYILG PQLLCAATEL PLQEAEVREL DATEVAESLV 480
  481 DDGLLRRRNG KYFPAPGLQP HAAVDIRGAG GQVVILEADT GRLLGSAGAG QAPASVHPGA 540
  541 VYLHQGESYV VDSLDLQEGI AFVHAEDPGY ATFAREITDI AVTGAGERLV FGPVTLGLVP 600
  601 VRVTHRVVGY LRRRLSGEVI DFIELDMPEH TLATTAAMYT ITEEALRDNG IDGPRIPGSL 660
  661 HAAEHAAIGL LPLVASCDRG DIGGLSTAVG PEPAGLPSVF VYDGHPGGAG FAERGFRRAS 720
  721 TWLGATAAAI EACECPRGCP SCVQSPKCGN GNDPLDKAGA ARVLRLVLAE LDRGPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle