YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85106532
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLYLLPIST RRTLLYCQKL QPPSSASTTT TKQKQSWGDY IQTKAALTWA SWEKKESGWQ  60
   61 KAVASYGNQL LRKLPYEEWA LKSMPPLTKS RQRQLEALLQ QQAQAEGGFE TESGEKGGSK 120
  121 RGKVDVDKVE VVYPGGLIKA EQVPRILHKL ATEREGHHKK WFWWCLAGMP VTIPIGILPL 180
  181 VPNLPFFYLV YRAWSHHRAL SGGKHISFLL QHASRLLTYH PSPILDEIYS TQRFPLPFTS 240
  241 EPTTGPEAET IKHPDPAKVV QAVNGGNTTT EKTDGVNMGH VLEQREVEDG EVLLLSQENA 300
  301 KKMVQLLEVP ELEVELERAI WQVETAVEKK NKEIGAEVKV DAPSVQDTKK ENEKEKVKTQ 360
  361

Type	Start	End	Confidence
Cytoplasmic	1	160	0.89
Transmembrane Helix	161	181	0.85
Non-Cytoplasmic	182	360	0.91