YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|32408325, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAIMQTCRS AATAPKVAVA VPVRALSTSA ALLKRHKYPT ARVTRDNSKQ RGESALRKSG  60
   61 TRWKLSVSDE PLPEPVPREE LPPIQVDENH GLWDFFYDRE TVAMAPLEHT KHGRAWTVSE 120
  121 LRKKSWDDLH RLWWVCVKER NRIATANWER TKSELGFGLA EANERDRNVK QTMRGIKHVL 180
  181 TERFYAWEDA VKLAEQDPEI DLSNPENPYT PSTFLEAEET AEGAEASETQ STTTEIDPTT 240
  241 IPSSKSQAEA PRISTVAGEI IIGANLDRRD HGEVRRKGHG GIDETKLVSK SNF

Type	Start	End	Confidence
Signal Peptide	1	30	0.53
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	293	0.99